IL_8RXH_075
3D structure
- PDB id
- 8RXH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CRYO-EM STRUCTURE OF LEISHMANIA MAJOR 80S RIBOSOME WITH A/P/E-site tRNA AND mRNA : PARENTAL STRAIN
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.93 Å
Loop
- Sequence
- ACUU*AU
- Length
- 6 nucleotides
- Bulged bases
- 8RXH|1|L1|C|1238, 8RXH|1|L1|U|1239
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8RXH_075 not in the Motif Atlas
- Geometric match to IL_1R3E_002
- Geometric discrepancy: 0.2348
- The information below is about IL_1R3E_002
- Detailed Annotation
- Multiple bulged bases
- Broad Annotation
- No text annotation
- Motif group
- IL_05670.1
- Basepair signature
- cWW-cWW
- Number of instances in this motif group
- 9
Unit IDs
8RXH|1|L1|A|1237
8RXH|1|L1|C|1238
8RXH|1|L1|U|1239
8RXH|1|L1|U|1240
*
8RXH|1|L1|A|1386
8RXH|1|L1|U|1387
Current chains
- Chain L1
- LSUa_rRNA_chain_1
Nearby chains
- Chain LH
- Putative 60S ribosomal protein L13a
- Chain LK
- Putative 40S ribosomal protein L14
- Chain LR
- 60S ribosomal protein L18a
- Chain Lc
- Putative 60S ribosomal protein L7
- Chain Lg
- Putative ribosomal protein l35a
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