IL_8RXH_083
3D structure
- PDB id
- 8RXH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CRYO-EM STRUCTURE OF LEISHMANIA MAJOR 80S RIBOSOME WITH A/P/E-site tRNA AND mRNA : PARENTAL STRAIN
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.93 Å
Loop
- Sequence
- CCU*AGUG
- Length
- 7 nucleotides
- Bulged bases
- 8RXH|1|L1|G|1519
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8RXH_083 not in the Motif Atlas
- Homologous match to IL_8C3A_061
- Geometric discrepancy: 0.1033
- The information below is about IL_8C3A_061
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_73554.3
- Basepair signature
- cWW-cWS-cWW
- Number of instances in this motif group
- 10
Unit IDs
8RXH|1|L1|C|1466
8RXH|1|L1|C|1467
8RXH|1|L1|U|1468
*
8RXH|1|L1|A|1518
8RXH|1|L1|G|1519
8RXH|1|L1|U|1520
8RXH|1|L1|G|1521
Current chains
- Chain L1
- LSUa_rRNA_chain_1
Nearby chains
- Chain L7
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain LC
- Putative ribosomal protein L1a
- Chain LL
- Putative 60S ribosomal protein L27A/L29
- Chain LZ
- Putative 60S ribosomal protein L28
- Chain Lf
- 60S ribosomal protein L32
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