IL_8RXH_102
3D structure
- PDB id
- 8RXH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CRYO-EM STRUCTURE OF LEISHMANIA MAJOR 80S RIBOSOME WITH A/P/E-site tRNA AND mRNA : PARENTAL STRAIN
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.93 Å
Loop
- Sequence
- CAG*CCG
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8RXH_102 not in the Motif Atlas
- Geometric match to IL_4WF9_063
- Geometric discrepancy: 0.1045
- The information below is about IL_4WF9_063
- Detailed Annotation
- Isolated tWW turn
- Broad Annotation
- No text annotation
- Motif group
- IL_10432.1
- Basepair signature
- cWW-tWW-cWW
- Number of instances in this motif group
- 10
Unit IDs
8RXH|1|L2|C|79
8RXH|1|L2|A|80
8RXH|1|L2|G|81
*
8RXH|1|L2|C|584
8RXH|1|L2|C|585
8RXH|1|L2|G|586
Current chains
- Chain L2
- LSUb_rRNA_chain_2
Nearby chains
- Chain L4
- Large subunit ribosomal RNA; LSU rRNA
- Chain LB
- Putative ribosomal protein L3
- Chain LJ
- Putative 60S ribosomal protein L23
- Chain LX
- Putative ribosomal protein L24
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