IL_8RXH_121
3D structure
- PDB id
- 8RXH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CRYO-EM STRUCTURE OF LEISHMANIA MAJOR 80S RIBOSOME WITH A/P/E-site tRNA AND mRNA : PARENTAL STRAIN
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.93 Å
Loop
- Sequence
- CAA*U(PSU)G
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Self-complementary:
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8RXH_121 not in the Motif Atlas
- Geometric match to IL_2ET8_001
- Geometric discrepancy: 0.1708
- The information below is about IL_2ET8_001
- Detailed Annotation
- Stack and bulge
- Broad Annotation
- Stack and bulge
- Motif group
- IL_53541.1
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 12
Unit IDs
8RXH|1|L2|C|612
8RXH|1|L2|A|613
8RXH|1|L2|A|614
*
8RXH|1|L2|U|625
8RXH|1|L2|PSU|626
8RXH|1|L2|G|627
Current chains
- Chain L2
- LSUb_rRNA_chain_2
Nearby chains
- Chain L1
- Large subunit ribosomal RNA; LSU rRNA
- Chain LB
- Putative ribosomal protein L3
- Chain LH
- Putative 60S ribosomal protein L13a
- Chain Lg
- Putative ribosomal protein l35a
Coloring options: