IL_8RXH_160
3D structure
- PDB id
- 8RXH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CRYO-EM STRUCTURE OF LEISHMANIA MAJOR 80S RIBOSOME WITH A/P/E-site tRNA AND mRNA : PARENTAL STRAIN
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.93 Å
Loop
- Sequence
- AAUCC*GUUCU
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8RXH_160 not in the Motif Atlas
- Geometric match to IL_2R8S_006
- Geometric discrepancy: 0.3383
- The information below is about IL_2R8S_006
- Detailed Annotation
- UAA/GAN variation
- Broad Annotation
- UAA/GAN variation
- Motif group
- IL_45790.2
- Basepair signature
- cWW-tSH-L-tHS-cWW
- Number of instances in this motif group
- 12
Unit IDs
8RXH|1|L3|A|40
8RXH|1|L3|A|41
8RXH|1|L3|U|42
8RXH|1|L3|C|43
8RXH|1|L3|C|44
*
8RXH|1|L3|G|185
8RXH|1|L3|U|186
8RXH|1|L3|U|187
8RXH|1|L3|C|188
8RXH|1|L3|U|189
Current chains
- Chain L3
- SR1_chain_3
Nearby chains
- Chain L1
- Large subunit ribosomal RNA; LSU rRNA
- Chain L2
- Large subunit ribosomal RNA; LSU rRNA
- Chain LQ
- Putative 60S ribosomal protein L19
- Chain Lh
- Putative 60S ribosomal protein L34
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