IL_8RXH_162
3D structure
- PDB id
- 8RXH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CRYO-EM STRUCTURE OF LEISHMANIA MAJOR 80S RIBOSOME WITH A/P/E-site tRNA AND mRNA : PARENTAL STRAIN
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.93 Å
Loop
- Sequence
- AUAAU*AAAAAU
- Length
- 11 nucleotides
- Bulged bases
- 8RXH|1|L3|A|151
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8RXH_162 not in the Motif Atlas
- Geometric match to IL_5TBW_071
- Geometric discrepancy: 0.2139
- The information below is about IL_5TBW_071
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_69313.1
- Basepair signature
- cWW-tWH-tHH-tHS-cWW
- Number of instances in this motif group
- 2
Unit IDs
8RXH|1|L3|A|70
8RXH|1|L3|U|71
8RXH|1|L3|A|72
8RXH|1|L3|A|73
8RXH|1|L3|U|74
*
8RXH|1|L3|A|147
8RXH|1|L3|A|148
8RXH|1|L3|A|149
8RXH|1|L3|A|150
8RXH|1|L3|A|151
8RXH|1|L3|U|152
Current chains
- Chain L3
- SR1_chain_3
Nearby chains
- Chain L1
- Large subunit ribosomal RNA; LSU rRNA
- Chain Lh
- Putative 60S ribosomal protein L34
- Chain Lk
- Putative ribosomal protein L38
Coloring options: