IL_8RXH_169
3D structure
- PDB id
- 8RXH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CRYO-EM STRUCTURE OF LEISHMANIA MAJOR 80S RIBOSOME WITH A/P/E-site tRNA AND mRNA : PARENTAL STRAIN
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.93 Å
Loop
- Sequence
- GGG*CUC
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Self-complementary:
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8RXH_169 not in the Motif Atlas
- Geometric match to IL_4LFB_061
- Geometric discrepancy: 0.1002
- The information below is about IL_4LFB_061
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- Isolated non-canonical cWW pair
- Motif group
- IL_86319.3
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 269
Unit IDs
8RXH|1|L4|G|3
8RXH|1|L4|G|4
8RXH|1|L4|G|5
*
8RXH|1|L4|C|19
8RXH|1|L4|U|20
8RXH|1|L4|C|21
Current chains
- Chain L4
- SR2_chain_4
Nearby chains
- Chain L1
- Large subunit ribosomal RNA; LSU rRNA
- Chain L2
- Large subunit ribosomal RNA; LSU rRNA
- Chain L5
- SR4_chain_5
- Chain L7
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain LT
- Putative 60S ribosomal protein L17
- Chain Lg
- Putative ribosomal protein l35a
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