IL_8RXH_183
3D structure
- PDB id
- 8RXH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CRYO-EM STRUCTURE OF LEISHMANIA MAJOR 80S RIBOSOME WITH A/P/E-site tRNA AND mRNA : PARENTAL STRAIN
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.93 Å
Loop
- Sequence
- CUG*CUUGAGG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8RXH_183 not in the Motif Atlas
- Geometric match to IL_5J7L_340
- Geometric discrepancy: 0.1232
- The information below is about IL_5J7L_340
- Detailed Annotation
- Isolated non-canonical cWW with bulges
- Broad Annotation
- Isolated non-canonical cWW with bulges
- Motif group
- IL_07785.1
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 33
Unit IDs
8RXH|1|L5|C|37
8RXH|1|L5|U|38
8RXH|1|L5|G|39
*
8RXH|1|L5|C|103
8RXH|1|L5|U|104
8RXH|1|L5|U|105
8RXH|1|L5|G|106
8RXH|1|L5|A|107
8RXH|1|L5|G|108
8RXH|1|L5|G|109
Current chains
- Chain L5
- SR4_chain_5
Nearby chains
- Chain L2
- Large subunit ribosomal RNA; LSU rRNA
- Chain L4
- Large subunit ribosomal RNA; LSU rRNA
- Chain LB
- Putative ribosomal protein L3
- Chain LX
- Putative ribosomal protein L24
- Chain Le
- Putative 60S ribosomal subunit protein L31
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