IL_8RXH_193
3D structure
- PDB id
- 8RXH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CRYO-EM STRUCTURE OF LEISHMANIA MAJOR 80S RIBOSOME WITH A/P/E-site tRNA AND mRNA : PARENTAL STRAIN
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.93 Å
Loop
- Sequence
- UU*ACA
- Length
- 5 nucleotides
- Bulged bases
- 8RXH|1|L8|C|67
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8RXH_193 not in the Motif Atlas
- Homologous match to IL_5TBW_372
- Geometric discrepancy: 0.1876
- The information below is about IL_5TBW_372
- Detailed Annotation
- Single bulged A
- Broad Annotation
- No text annotation
- Motif group
- IL_31462.1
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 127
Unit IDs
8RXH|1|L8|U|19
8RXH|1|L8|U|20
*
8RXH|1|L8|A|66
8RXH|1|L8|C|67
8RXH|1|L8|A|68
Current chains
- Chain L8
- 5S_rRNA_chain_8
Nearby chains
- Chain L2
- Large subunit ribosomal RNA; LSU rRNA
- Chain LD
- 60S ribosomal protein L11
- Chain LN
- Putative 60S ribosomal protein L10
- Chain LO
- Putative 60S ribosomal protein L5
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