IL_8RXH_206
3D structure
- PDB id
- 8RXH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CRYO-EM STRUCTURE OF LEISHMANIA MAJOR 80S RIBOSOME WITH A/P/E-site tRNA AND mRNA : PARENTAL STRAIN
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.93 Å
Loop
- Sequence
- AAUCAC*GGAAU
- Length
- 11 nucleotides
- Bulged bases
- 8RXH|1|S1|U|66, 8RXH|1|S1|A|68
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8RXH_206 not in the Motif Atlas
- Homologous match to IL_4V88_390
- Geometric discrepancy: 0.213
- The information below is about IL_4V88_390
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_87517.1
- Basepair signature
- cWW-L-R-L-R-tHS-L-cWW
- Number of instances in this motif group
- 2
Unit IDs
8RXH|1|S1|A|64
8RXH|1|S1|A|65
8RXH|1|S1|U|66
8RXH|1|S1|C|67
8RXH|1|S1|A|68
8RXH|1|S1|C|69
*
8RXH|1|S1|G|80
8RXH|1|S1|G|81
8RXH|1|S1|A|82
8RXH|1|S1|A|83
8RXH|1|S1|U|84
Current chains
- Chain S1
- SSU_rRNA_chain_S1
Nearby chains
- Chain LX
- Putative ribosomal protein L24
- Chain SG
- 40S ribosomal protein S6
- Chain SZ
- 40S ribosomal protein S24
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