IL_8RXH_210
3D structure
- PDB id
- 8RXH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CRYO-EM STRUCTURE OF LEISHMANIA MAJOR 80S RIBOSOME WITH A/P/E-site tRNA AND mRNA : PARENTAL STRAIN
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.93 Å
Loop
- Sequence
- GGAUAAC*GCUAAUAC
- Length
- 15 nucleotides
- Bulged bases
- 8RXH|1|S1|U|175
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8RXH_210 not in the Motif Atlas
- Homologous match to IL_8C3A_402
- Geometric discrepancy: 0.1267
- The information below is about IL_8C3A_402
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_80604.4
- Basepair signature
- cWW-L-R-tWH-tWH-tHW-L-R-cWW
- Number of instances in this motif group
- 4
Unit IDs
8RXH|1|S1|G|148
8RXH|1|S1|G|149
8RXH|1|S1|A|150
8RXH|1|S1|U|151
8RXH|1|S1|A|152
8RXH|1|S1|A|153
8RXH|1|S1|C|154
*
8RXH|1|S1|G|170
8RXH|1|S1|C|171
8RXH|1|S1|U|172
8RXH|1|S1|A|173
8RXH|1|S1|A|174
8RXH|1|S1|U|175
8RXH|1|S1|A|176
8RXH|1|S1|C|177
Current chains
- Chain S1
- SSU_rRNA_chain_S1
Nearby chains
- Chain LX
- Putative ribosomal protein L24
- Chain SG
- 40S ribosomal protein S6
- Chain SZ
- 40S ribosomal protein S24
Coloring options: