IL_8SCB_071
3D structure
- PDB id
- 8SCB (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Terminating ribosome with SRI-41315
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.5 Å
Loop
- Sequence
- U(PSU)UG*C(A2M)GA
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Self-complementary:
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8SCB_071 not in the Motif Atlas
- Geometric match to IL_402D_001
- Geometric discrepancy: 0.3427
- The information below is about IL_402D_001
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_77658.1
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 34
Unit IDs
8SCB|1|5|U|1861
8SCB|1|5|PSU|1862
8SCB|1|5|U|1863
8SCB|1|5|G|1864
*
8SCB|1|5|C|1870
8SCB|1|5|A2M|1871
8SCB|1|5|G|1872
8SCB|1|5|A|1873
Current chains
- Chain 5
- 28S_rRNA
Nearby chains
- Chain 7
- 5S ribosomal RNA; 5S rRNA
- Chain I
- 60S ribosomal protein L10
- Chain b
- 60S ribosomal protein L29
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