IL_8T2Z_106
3D structure
- PDB id
- 8T2Z (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Hypomethylated yeast 80S bound with cycloheximide, P-site tRNA, and A-site tRNA, messenger RNA, POST
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.4 Å
Loop
- Sequence
- CAUA*UAAGCG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8T2Z_106 not in the Motif Atlas
- Geometric match to IL_5TBW_475
- Geometric discrepancy: 0.0822
- The information below is about IL_5TBW_475
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_28976.1
- Basepair signature
- cWW-L-cWW-cSH-R-cWW
- Number of instances in this motif group
- 2
Unit IDs
8T2Z|1|A1|C|2889
8T2Z|1|A1|A|2890
8T2Z|1|A1|U|2891
8T2Z|1|A1|A|2892
*
8T2Z|1|A1|U|2909
8T2Z|1|A1|A|2910
8T2Z|1|A1|A|2911
8T2Z|1|A1|G|2912
8T2Z|1|A1|C|2913
8T2Z|1|A1|G|2914
Current chains
- Chain A1
- 25S rRNA
Nearby chains
- Chain AB
- 60S ribosomal protein L3
- Chain AH
- 60S ribosomal protein L9-A
- Chain AO
- 60S ribosomal protein L16-A
- Chain AV
- 60S ribosomal protein L23-A
- Chain Am
- Ubiquitin-60S ribosomal protein L40
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