IL_8T5H_003
3D structure
- PDB id
- 8T5H (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM studies of the interplay between uS2 ribosomal protein and leaderless mRNA during bacterial translation initiation
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.3 Å
Loop
- Sequence
- CC*GAAG
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8T5H_003 not in the Motif Atlas
- Homologous match to IL_8C3A_145
- Geometric discrepancy: 0.5197
- The information below is about IL_8C3A_145
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_15052.3
- Basepair signature
- cWW-L-cWW-L
- Number of instances in this motif group
- 8
Unit IDs
8T5H|1|A|C|30
8T5H|1|A|C|31
*
8T5H|1|A|G|51
8T5H|1|A|A|52
8T5H|1|A|A|53
8T5H|1|A|G|54
Current chains
- Chain A
- 5S
Nearby chains
- Chain F
- 50S ribosomal protein L5
- Chain O
- 50S ribosomal protein L18
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