IL_8T5H_144
3D structure
- PDB id
- 8T5H (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM studies of the interplay between uS2 ribosomal protein and leaderless mRNA during bacterial translation initiation
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.3 Å
Loop
- Sequence
- GUC*GAUAC
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8T5H_144 not in the Motif Atlas
- Homologous match to IL_6CZR_361
- Geometric discrepancy: 0.5804
- The information below is about IL_6CZR_361
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_56539.1
- Basepair signature
- cWW-cWW-cSH-cWW-L
- Number of instances in this motif group
- 4
Unit IDs
8T5H|1|v|G|597
8T5H|1|v|U|598
8T5H|1|v|C|599
*
8T5H|1|v|G|639
8T5H|1|v|A|640
8T5H|1|v|U|641
8T5H|1|v|A|642
8T5H|1|v|C|643
Current chains
- Chain v
- 16S
Nearby chains
- Chain g
- 30S ribosomal protein S8
- Chain p
- 30S ribosomal protein S17
Coloring options: