IL_8UIZ_036
3D structure
- PDB id
- 8UIZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- In situ human P-E state 80S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.43 Å
Loop
- Sequence
- CUC*GCCCG
- Length
- 8 nucleotides
- Bulged bases
- 8UIZ|1|L5|C|1214, 8UIZ|1|L5|C|1215
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8UIZ_036 not in the Motif Atlas
- Geometric match to IL_7ZO1_011
- Geometric discrepancy: 0.3743
- The information below is about IL_7ZO1_011
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_44465.1
- Basepair signature
- cWW-L-R-cWW
- Number of instances in this motif group
- 9
Unit IDs
8UIZ|1|L5|C|1082
8UIZ|1|L5|U|1083
8UIZ|1|L5|C|1084
*
8UIZ|1|L5|G|1213
8UIZ|1|L5|C|1214
8UIZ|1|L5|C|1215
8UIZ|1|L5|C|1216
8UIZ|1|L5|G|1217
Current chains
- Chain L5
- 28S rRNA
Nearby chains
- Chain LF
- 60S ribosomal protein L7
- Chain Lb
- Large ribosomal subunit protein eL29
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