IL_8UJK_191
3D structure
- PDB id
- 8UJK (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- In situ HHT and CHX treated A-P-Z state 80S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.54 Å
Loop
- Sequence
- UGGU*AA
- Length
- 6 nucleotides
- Bulged bases
- 8UJK|1|S2|G|113
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8UJK_191 not in the Motif Atlas
- Homologous match to IL_8CRE_398
- Geometric discrepancy: 0.2373
- The information below is about IL_8CRE_398
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_71421.1
- Basepair signature
- cWW-cWW
- Number of instances in this motif group
- 27
Unit IDs
8UJK|1|S2|U|112
8UJK|1|S2|G|113
8UJK|1|S2|G|114
8UJK|1|S2|U|115
*
8UJK|1|S2|A|348
8UJK|1|S2|A|349
Current chains
- Chain S2
- 18S rRNA
Nearby chains
- Chain SE
- Small ribosomal subunit protein eS4, X isoform
- Chain SI
- 40S ribosomal protein S8
- Chain SL
- 40S ribosomal protein S11
Coloring options: