IL_8URH_023
3D structure
- PDB id
- 8URH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Escherichia coli transcription-translation coupled complex class B (TTC-B) containing RfaH bound to ops signal, mRNA with a 27 nt long spacer, and fMet-tRNAs in E-site and P-site of the ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 5.7 Å
Loop
- Sequence
- GAAGGG*CAUUGAC
- Length
- 13 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8URH_023 not in the Motif Atlas
- Homologous match to IL_5J7L_023
- Geometric discrepancy: 0.1603
- The information below is about IL_5J7L_023
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_70801.1
- Basepair signature
- cWW-cWW-L-R-tWW-L-R-L-cWW
- Number of instances in this motif group
- 1
Unit IDs
8URH|1|D|G|450
8URH|1|D|A|451
8URH|1|D|A|452
8URH|1|D|G|453
8URH|1|D|G|454
8URH|1|D|G|455
*
8URH|1|D|C|477
8URH|1|D|A|478
8URH|1|D|U|479
8URH|1|D|U|480
8URH|1|D|G|481
8URH|1|D|A|482
8URH|1|D|C|483
Current chains
- Chain D
- 16S rRNA
Nearby chains
- Chain U
- 30S ribosomal protein S16
Coloring options: