IL_8URI_036
3D structure
- PDB id
- 8URI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Escherichia coli transcription-translation coupled complex class B (TTC-B) containing RfaH bound to ops signal, NusA, mRNA with a 27 nt long spacer, and fMet-tRNAs in E-site and P-site of the ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 5.3 Å
Loop
- Sequence
- GGGAG*UC
- Length
- 7 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8URI_036 not in the Motif Atlas
- Homologous match to IL_4LFB_032
- Geometric discrepancy: 0.0648
- The information below is about IL_4LFB_032
- Detailed Annotation
- Left turn
- Broad Annotation
- Left turn
- Motif group
- IL_29346.2
- Basepair signature
- cWW-L-cWW-L-L
- Number of instances in this motif group
- 3
Unit IDs
8URI|1|D|G|774
8URI|1|D|G|775
8URI|1|D|G|776
8URI|1|D|A|777
8URI|1|D|G|778
*
8URI|1|D|U|804
8URI|1|D|C|805
Current chains
- Chain D
- 16S rRNA
Nearby chains
- Chain Q
- 30S ribosomal protein S11
- Chain a
- Large subunit ribosomal RNA; LSU rRNA
- Chain h
- 50S ribosomal protein L2
Coloring options: