IL_8URI_173
3D structure
- PDB id
- 8URI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Escherichia coli transcription-translation coupled complex class B (TTC-B) containing RfaH bound to ops signal, NusA, mRNA with a 27 nt long spacer, and fMet-tRNAs in E-site and P-site of the ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 5.3 Å
Loop
- Sequence
- CUC*GCGAG
- Length
- 8 nucleotides
- Bulged bases
- 8URI|1|a|G|2576, 8URI|1|a|A|2577
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8URI_173 not in the Motif Atlas
- Homologous match to IL_5J7L_340
- Geometric discrepancy: 0.0696
- The information below is about IL_5J7L_340
- Detailed Annotation
- Isolated non-canonical cWW with bulges
- Broad Annotation
- Isolated non-canonical cWW with bulges
- Motif group
- IL_07785.1
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 33
Unit IDs
8URI|1|a|C|2510
8URI|1|a|U|2511
8URI|1|a|C|2512
*
8URI|1|a|G|2574
8URI|1|a|C|2575
8URI|1|a|G|2576
8URI|1|a|A|2577
8URI|1|a|G|2578
Current chains
- Chain a
- 23S rRNA
Nearby chains
- Chain i
- 50S ribosomal protein L32
- Chain j
- 50S ribosomal protein L3
Coloring options: