IL_8URI_183
3D structure
- PDB id
- 8URI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Escherichia coli transcription-translation coupled complex class B (TTC-B) containing RfaH bound to ops signal, NusA, mRNA with a 27 nt long spacer, and fMet-tRNAs in E-site and P-site of the ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 5.3 Å
Loop
- Sequence
- GAUAAG*CGAAAC
- Length
- 12 nucleotides
- Bulged bases
- 8URI|1|a|A|2765
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8URI_183 not in the Motif Atlas
- Homologous match to IL_5J7L_350
- Geometric discrepancy: 0.0768
- The information below is about IL_5J7L_350
- Detailed Annotation
- UAA/GAN with extra cWW
- Broad Annotation
- No text annotation
- Motif group
- IL_49767.8
- Basepair signature
- cWW-cWW-tWH-L-tHS-cWW
- Number of instances in this motif group
- 6
Unit IDs
8URI|1|a|G|2737
8URI|1|a|A|2738
8URI|1|a|U|2739
8URI|1|a|A|2740
8URI|1|a|A|2741
8URI|1|a|G|2742
*
8URI|1|a|C|2762
8URI|1|a|G|2763
8URI|1|a|A|2764
8URI|1|a|A|2765
8URI|1|a|A|2766
8URI|1|a|C|2767
Current chains
- Chain a
- 23S rRNA
Nearby chains
- Chain p
- 50S ribosomal protein L6
- Chain q
- 50S ribosomal protein L36
- Chain s
- 50S ribosomal protein L13
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