IL_8URM_139
3D structure
- PDB id
- 8URM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S ribosome with unmodified tRNAPro(GGG) bound to slippery P-site CCC-C codon and tRNAVal(UAC) in the A site
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- UGAAAUCC*GAACUG
- Length
- 14 nucleotides
- Bulged bases
- 8URM|1|2|U|632
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8URM_139 not in the Motif Atlas
- Geometric match to IL_5J7L_030
- Geometric discrepancy: 0.1457
- The information below is about IL_5J7L_030
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_78349.3
- Basepair signature
- cWW-L-R-L-R-L-R-L-cWW-L-L
- Number of instances in this motif group
- 2
Unit IDs
8URM|1|2|U|605
8URM|1|2|G|606
8URM|1|2|A|607
8URM|1|2|A|608
8URM|1|2|A|609
8URM|1|2|U|610
8URM|1|2|C|611
8URM|1|2|C|612
*
8URM|1|2|G|628
8URM|1|2|A|629
8URM|1|2|A|630
8URM|1|2|C|631
8URM|1|2|U|632
8URM|1|2|G|633
Current chains
- Chain 2
- 16S ribosomal RNA
Nearby chains
- Chain i
- 30S ribosomal protein S4
- Chain m
- Small ribosomal subunit protein uS8
- Chain u
- 30S ribosomal protein S16
- Chain v
- Small ribosomal subunit protein uS17
Coloring options: