IL_8UT0_045
3D structure
- PDB id
- 8UT0 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Eukaryotic 80S ribosome with Reh1, eIF5A and A/P site tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.22 Å
Loop
- Sequence
- GGUC*GGAC
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8UT0_045 not in the Motif Atlas
- Homologous match to IL_8C3A_437
- Geometric discrepancy: 0.0775
- The information below is about IL_8C3A_437
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_54697.2
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 51
Unit IDs
8UT0|1|2|G|871
8UT0|1|2|G|872
8UT0|1|2|U|873
8UT0|1|2|C|874
*
8UT0|1|2|G|953
8UT0|1|2|G|954
8UT0|1|2|A|955
8UT0|1|2|C|956
Current chains
- Chain 2
- 18S rRNA
Nearby chains
- Chain SQ
- 40S ribosomal protein S1-A
- Chain SY
- 40S ribosomal protein S13
- Chain Sf
- 40S ribosomal protein S27-A
Coloring options: