IL_8UT0_057
3D structure
- PDB id
- 8UT0 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Eukaryotic 80S ribosome with Reh1, eIF5A and A/P site tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.22 Å
Loop
- Sequence
- ACCA*UCCCU
- Length
- 9 nucleotides
- Bulged bases
- 8UT0|1|2|C|1158, 8UT0|1|2|C|1159
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8UT0_057 not in the Motif Atlas
- Homologous match to IL_8P9A_431
- Geometric discrepancy: 0.1422
- The information below is about IL_8P9A_431
- Detailed Annotation
- C-loop
- Broad Annotation
- No text annotation
- Motif group
- IL_63596.12
- Basepair signature
- cWW-cWS-cSH-tWH-cWW-L
- Number of instances in this motif group
- 22
Unit IDs
8UT0|1|2|A|1157
8UT0|1|2|C|1158
8UT0|1|2|C|1159
8UT0|1|2|A|1160
*
8UT0|1|2|U|1617
8UT0|1|2|C|1618
8UT0|1|2|C|1619
8UT0|1|2|C|1620
8UT0|1|2|U|1621
Current chains
- Chain 2
- 18S rRNA
Nearby chains
- Chain D
- Messenger RNA (5'-R(P*AP*AP*UP*AP*UP*GP*AP*AP*AP*A)-3')
- Chain SB
- 40S ribosomal protein S5
- Chain SF
- 40S ribosomal protein S16-A
- Chain SL
- 40S ribosomal protein S28-A
- Chain n
- Transfer RNA; tRNA
Coloring options: