IL_8UT0_058
3D structure
- PDB id
- 8UT0 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Eukaryotic 80S ribosome with Reh1, eIF5A and A/P site tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.22 Å
Loop
- Sequence
- CCU*GCG
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8UT0_058 not in the Motif Atlas
- Homologous match to IL_8C3A_450
- Geometric discrepancy: 0.1245
- The information below is about IL_8C3A_450
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_10289.2
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 237
Unit IDs
8UT0|1|2|C|1173
8UT0|1|2|C|1174
8UT0|1|2|U|1175
*
8UT0|1|2|G|1464
8UT0|1|2|C|1465
8UT0|1|2|G|1466
Current chains
- Chain 2
- 18S rRNA
Nearby chains
- Chain AA
- 40S ribosomal protein S25-A
- Chain SF
- 40S ribosomal protein S16-A
- Chain SH
- 40S ribosomal protein S18-A
- Chain SI
- 40S ribosomal protein S19-A
- Chain n
- Transfer RNA; tRNA
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