IL_8UT0_075
3D structure
- PDB id
- 8UT0 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Eukaryotic 80S ribosome with Reh1, eIF5A and A/P site tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.22 Å
Loop
- Sequence
- GGGAUA*UUCAAC
- Length
- 12 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8UT0_075 not in the Motif Atlas
- Homologous match to IL_8C3A_507
- Geometric discrepancy: 0.1316
- The information below is about IL_8C3A_507
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_85536.1
- Basepair signature
- cWW-tSH-L-R-L-R-cWW-cWW
- Number of instances in this motif group
- 7
Unit IDs
8UT0|1|2|G|1540
8UT0|1|2|G|1541
8UT0|1|2|G|1542
8UT0|1|2|A|1543
8UT0|1|2|U|1544
8UT0|1|2|A|1545
*
8UT0|1|2|U|1566
8UT0|1|2|U|1567
8UT0|1|2|C|1568
8UT0|1|2|A|1569
8UT0|1|2|A|1570
8UT0|1|2|C|1571
Current chains
- Chain 2
- 18S rRNA
Nearby chains
- Chain AA
- 40S ribosomal protein S25-A
- Chain SH
- 40S ribosomal protein S18-A
- Chain SI
- 40S ribosomal protein S19-A
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