IL_8UT0_082
3D structure
- PDB id
- 8UT0 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Eukaryotic 80S ribosome with Reh1, eIF5A and A/P site tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.22 Å
Loop
- Sequence
- UUG*UA
- Length
- 5 nucleotides
- Bulged bases
- 8UT0|1|2|U|1657
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8UT0_082 not in the Motif Atlas
- Homologous match to IL_8C3A_476
- Geometric discrepancy: 0.1664
- The information below is about IL_8C3A_476
- Detailed Annotation
- Single bulged U
- Broad Annotation
- No text annotation
- Motif group
- IL_89505.2
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 94
Unit IDs
8UT0|1|2|U|1656
8UT0|1|2|U|1657
8UT0|1|2|G|1658
*
8UT0|1|2|U|1743
8UT0|1|2|A|1744
Current chains
- Chain 2
- 18S rRNA
Nearby chains
- Chain A
- Large subunit ribosomal RNA; LSU rRNA
- Chain LX
- 60S ribosomal protein L23-A
- Chain Lp
- 60S ribosomal protein L41-A
- Chain Sc
- 40S ribosomal protein S23-A
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