IL_8UTI_112
3D structure
- PDB id
- 8UTI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Eukaryotic 80S ribosome with Reh1 and A/P site tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.13 Å
Loop
- Sequence
- UUUUUG*CGAAG
- Length
- 11 nucleotides
- Bulged bases
- 8UTI|1|A|U|3056, 8UTI|1|A|U|3058
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8UTI_112 not in the Motif Atlas
- Homologous match to IL_8P9A_346
- Geometric discrepancy: 0.1041
- The information below is about IL_8P9A_346
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_98200.1
- Basepair signature
- cWW-L-R-tHW-L-cWW
- Number of instances in this motif group
- 3
Unit IDs
8UTI|1|A|U|3054
8UTI|1|A|U|3055
8UTI|1|A|U|3056
8UTI|1|A|U|3057
8UTI|1|A|U|3058
8UTI|1|A|G|3059
*
8UTI|1|A|C|3084
8UTI|1|A|G|3085
8UTI|1|A|A|3086
8UTI|1|A|A|3087
8UTI|1|A|G|3088
Current chains
- Chain A
- 25S rRNA
Nearby chains
- Chain LE
- 60S ribosomal protein L3
- Chain LY
- 60S ribosomal protein L24-A
- Chain Lf
- 60S ribosomal protein L31-A
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