IL_8UU9_169
3D structure
- PDB id
- 8UU9 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the ratcheted Listeria innocua 70S ribosome (head-swiveled) in complex with HflXr and pe/E-tRNA (structure II-D)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- GUCG*CCAAUC
- Length
- 10 nucleotides
- Bulged bases
- 8UU9|1|a|C|1264, 8UU9|1|a|A|1287
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8UU9_169 not in the Motif Atlas
- Homologous match to IL_5J7L_055
- Geometric discrepancy: 0.4175
- The information below is about IL_5J7L_055
- Detailed Annotation
- 180 degree turn
- Broad Annotation
- No text annotation
- Motif group
- IL_11344.2
- Basepair signature
- cWW-cSS-L-cWW
- Number of instances in this motif group
- 2
Unit IDs
8UU9|1|a|G|1262
8UU9|1|a|U|1263
8UU9|1|a|C|1264
8UU9|1|a|G|1265
*
8UU9|1|a|C|1284
8UU9|1|a|C|1285
8UU9|1|a|A|1286
8UU9|1|a|A|1287
8UU9|1|a|U|1288
8UU9|1|a|C|1289
Current chains
- Chain a
- 16S Ribosomal RNA
Nearby chains
- Chain c
- Small ribosomal subunit protein uS3
- Chain j
- Small ribosomal subunit protein uS10
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