IL_8UXA_030
3D structure
- PDB id
- 8UXA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Glucose treated mitochondrial ribosome of saccharomyces cerevisiae class I
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- AUAAA*UGAAU
- Length
- 10 nucleotides
- Bulged bases
- 8UXA|1|A|A|1176
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8UXA_030 not in the Motif Atlas
- Geometric match to IL_8P9A_348
- Geometric discrepancy: 0.1675
- The information below is about IL_8P9A_348
- Detailed Annotation
- UAA/GAN
- Broad Annotation
- No text annotation
- Motif group
- IL_08938.1
- Basepair signature
- cWW-tWH-L-tHS-cWW
- Number of instances in this motif group
- 22
Unit IDs
8UXA|1|A|A|924
8UXA|1|A|U|925
8UXA|1|A|A|926
8UXA|1|A|A|927
8UXA|1|A|A|928
*
8UXA|1|A|U|1173
8UXA|1|A|G|1174
8UXA|1|A|A|1175
8UXA|1|A|A|1176
8UXA|1|A|U|1177
Current chains
- Chain A
- Large ribosomal subunit rRNA
Nearby chains
- Chain 4
- Large ribosomal subunit protein mL43
- Chain N
- Large ribosomal subunit protein bL21m
- Chain U
- Large ribosomal subunit protein uL30m
- Chain a
- Large ribosomal subunit protein mL58
- Chain c
- Large ribosomal subunit protein mL60
Coloring options: