IL_8UXA_119
3D structure
- PDB id
- 8UXA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Glucose treated mitochondrial ribosome of saccharomyces cerevisiae class I
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- GAAU*AGAC
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8UXA_119 not in the Motif Atlas
- Geometric match to IL_8P9A_421
- Geometric discrepancy: 0.1942
- The information below is about IL_8P9A_421
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_15225.2
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 39
Unit IDs
8UXA|1|AL|G|739
8UXA|1|AL|A|740
8UXA|1|AL|A|741
8UXA|1|AL|U|742
*
8UXA|1|AL|A|779
8UXA|1|AL|G|780
8UXA|1|AL|A|781
8UXA|1|AL|C|782
Current chains
- Chain AL
- Small ribosomal subunit rRNA
Nearby chains
- Chain B
- Large ribosomal subunit protein uL2m
- Chain l
- 37S ribosomal protein MRP17, mitochondrial
- Chain q
- Small ribosomal subunit protein uS11m
- Chain x
- Small ribosomal subunit protein bS18m
- Chain z
- Small ribosomal subunit protein bS21m
Coloring options: