IL_8UXA_128

3D structure

PDB id

8UXA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Glucose treated mitochondrial ribosome of saccharomyces cerevisiae class I

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

AUUA*UAUU

Length

8 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8UXA_128 not in the Motif Atlas

Geometric match to IL_5EW4_002

Geometric discrepancy: 0.3808

The information below is about IL_5EW4_002

Detailed Annotation

Tandem non-canonical cWW pairs

Broad Annotation

No text annotation

Motif group

IL_15225.2

Basepair signature

cWW-cWW-cWW-cWW

Number of instances in this motif group

39

Unit IDs

8UXA|1|AL|A|1062
8UXA|1|AL|U|1063
8UXA|1|AL|U|1064
8UXA|1|AL|A|1065
*
8UXA|1|AL|U|1087
8UXA|1|AL|A|1088
8UXA|1|AL|U|1089
8UXA|1|AL|U|1090

Current chains

Chain AL

Small ribosomal subunit rRNA

Nearby chains

Chain AJ

Small ribosomal subunit protein mS33

Chain t

37S ribosomal protein MRP2, mitochondrial