IL_8VFT_024
3D structure
- PDB id
- 8VFT (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Translating 80S rabbit ribosome stalled by emetine with eEF2
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.3 Å
Loop
- Sequence
- AUUCAAC*GCGCAUUU
- Length
- 15 nucleotides
- Bulged bases
- 8VFT|1|5|U|687
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8VFT_024 not in the Motif Atlas
- Homologous match to IL_8GLP_026
- Geometric discrepancy: 0.5931
- The information below is about IL_8GLP_026
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8VFT|1|5|A|466
8VFT|1|5|U|467
8VFT|1|5|U|468
8VFT|1|5|C|469
8VFT|1|5|A|470
8VFT|1|5|A|471
8VFT|1|5|C|472
*
8VFT|1|5|G|682
8VFT|1|5|C|683
8VFT|1|5|G|684
8VFT|1|5|C|685
8VFT|1|5|A|686
8VFT|1|5|U|687
8VFT|1|5|U|688
8VFT|1|5|U|689
Current chains
- Chain 5
- 28S rRNA
Nearby chains
- Chain E
- eL6
- Chain r
- eL28
Coloring options: