IL_8VOS_160
3D structure
- PDB id
- 8VOS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Escherichia coli transcription-translation loosely coupled complex (TTC-LC) containing mRNA with a 60 nt long spacer, NusG, NusA, and fMet-tRNAs in E-site and P-site
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.6 Å
Loop
- Sequence
- UCACU*AAA
- Length
- 8 nucleotides
- Bulged bases
- 8VOS|1|a|A|2726
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8VOS_160 not in the Motif Atlas
- Geometric match to IL_5J7L_347
- Geometric discrepancy: 0.0642
- The information below is about IL_5J7L_347
- Detailed Annotation
- C-loop
- Broad Annotation
- No text annotation
- Motif group
- IL_63596.11
- Basepair signature
- cWW-cWS-cSH-tWH-cWW-L
- Number of instances in this motif group
- 19
Unit IDs
8VOS|1|a|U|2680
8VOS|1|a|C|2681
8VOS|1|a|A|2682
8VOS|1|a|C|2683
8VOS|1|a|U|2684
*
8VOS|1|a|A|2725
8VOS|1|a|A|2726
8VOS|1|a|A|2727
Current chains
- Chain a
- 23S rRNA
Nearby chains
- Chain j
- 50S ribosomal protein L3
- Chain t
- Large ribosomal subunit protein uL14
- Chain w
- Large ribosomal subunit protein bL17
- Chain y
- Large ribosomal subunit protein bL19
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