IL_8VVT_080
3D structure
- PDB id
- 8VVT (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mammalian ribosomes bound to Anisomycin in the rotated conformation
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- CGC*GGUG
- Length
- 7 nucleotides
- Bulged bases
- 8VVT|1|WA|G|2348
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8VVT_080 not in the Motif Atlas
- Geometric match to IL_8CRE_061
- Geometric discrepancy: 0.0994
- The information below is about IL_8CRE_061
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_42997.3
- Basepair signature
- cWW-L-R-cWW
- Number of instances in this motif group
- 20
Unit IDs
8VVT|1|WA|C|2295
8VVT|1|WA|G|2296
8VVT|1|WA|C|2297
*
8VVT|1|WA|G|2347
8VVT|1|WA|G|2348
8VVT|1|WA|U|2349
8VVT|1|WA|G|2350
Current chains
- Chain WA
- 28S rRNA
Nearby chains
- Chain C
- uL4
- Chain DA
- eL32
- Chain PA
- eL28
- Chain YA
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain Z
- uL15
Coloring options: