IL_8VVT_121
3D structure
- PDB id
- 8VVT (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mammalian ribosomes bound to Anisomycin in the rotated conformation
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- CAG*CGUGG
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8VVT_121 not in the Motif Atlas
- Geometric match to IL_8CRE_108
- Geometric discrepancy: 0.1067
- The information below is about IL_8CRE_108
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_61476.2
- Basepair signature
- cWW-tSH-L-cWW-L
- Number of instances in this motif group
- 7
Unit IDs
8VVT|1|WA|C|4248
8VVT|1|WA|A|4249
8VVT|1|WA|G|4250
*
8VVT|1|WA|C|4268
8VVT|1|WA|G|4269
8VVT|1|WA|U|4270
8VVT|1|WA|G|4271
8VVT|1|WA|G|4272
Current chains
- Chain WA
- 28S rRNA
Nearby chains
- Chain D
- L5
- Chain J
- L11
- Chain S
- eL21
- Chain XA
- 5S ribosomal RNA; 5S rRNA
Coloring options: