IL_8VVU_028

3D structure

PDB id

8VVU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Anisomycin-bound mammalian ribosome with partially accommodated A-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

AUUCAAC*GCGCAUUU

Length

15 nucleotides

Bulged bases

8VVU|1|WA|U|467, 8VVU|1|WA|U|688

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8VVU|1|WA|A|466
8VVU|1|WA|U|467
8VVU|1|WA|U|468
8VVU|1|WA|C|469
8VVU|1|WA|A|470
8VVU|1|WA|A|471
8VVU|1|WA|C|472
*
8VVU|1|WA|G|683
8VVU|1|WA|C|684
8VVU|1|WA|G|685
8VVU|1|WA|C|686
8VVU|1|WA|A|687
8VVU|1|WA|U|688
8VVU|1|WA|U|689
8VVU|1|WA|U|690

Current chains

Chain WA

28S rRNA

Nearby chains

Chain E

L6

Chain PA

L28