IL_8VVU_236
3D structure
- PDB id
- 8VVU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Anisomycin-bound mammalian ribosome with partially accommodated A-site tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- GCCC*GUC
- Length
- 7 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8VVU_236 not in the Motif Atlas
- Geometric match to IL_4N0T_004
- Geometric discrepancy: 0.2647
- The information below is about IL_4N0T_004
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_32983.1
- Basepair signature
- cWW-L-cWW-cWW
- Number of instances in this motif group
- 7
Unit IDs
8VVU|1|ZA|G|1270
8VVU|1|ZA|C|1271
8VVU|1|ZA|C|1272
8VVU|1|ZA|C|1273
*
8VVU|1|ZA|G|1510
8VVU|1|ZA|U|1511
8VVU|1|ZA|C|1512
Current chains
- Chain ZA
- 18S rRNA
Nearby chains
- Chain DC
- uS14
- Chain FC
- S27A
- Chain KB
- S10
- Chain PB
- S15
Coloring options: