IL_8VVV_222
3D structure
- PDB id
- 8VVV (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mammalian ribosomes bound to Anisomycin in the nonrotated conformation
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- CGA*UCUUUGG
- Length
- 10 nucleotides
- Bulged bases
- 8VVV|1|9|C|1153, 8VVV|1|9|U|1155, 8VVV|1|9|G|1157
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8VVV_222 not in the Motif Atlas
- Geometric match to IL_8CRE_439
- Geometric discrepancy: 0.1417
- The information below is about IL_8CRE_439
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_82706.2
- Basepair signature
- cWW-L-R-L-cWW
- Number of instances in this motif group
- 3
Unit IDs
8VVV|1|9|C|1091
8VVV|1|9|G|1092
8VVV|1|9|A|1093
*
8VVV|1|9|U|1152
8VVV|1|9|C|1153
8VVV|1|9|U|1154
8VVV|1|9|U|1155
8VVV|1|9|U|1156
8VVV|1|9|G|1157
8VVV|1|9|G|1158
Current chains
- Chain 9
- 18S rRNA
Nearby chains
- Chain CC
- eS1
- Chain LL
- uS17
- Chain NN
- uS15
- Chain WW
- uS8
- Chain XX
- uS12
- Chain bb
- eS27
Coloring options: