IL_8VVV_228
3D structure
- PDB id
- 8VVV (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mammalian ribosomes bound to Anisomycin in the nonrotated conformation
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- ACCA*UCCCU
- Length
- 9 nucleotides
- Bulged bases
- 8VVV|1|9|C|1215, 8VVV|1|9|C|1216
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8VVV_228 not in the Motif Atlas
- Geometric match to IL_8CRE_445
- Geometric discrepancy: 0.134
- The information below is about IL_8CRE_445
- Detailed Annotation
- C-loop
- Broad Annotation
- No text annotation
- Motif group
- IL_63596.12
- Basepair signature
- cWW-cWS-cSH-tWH-cWW-L
- Number of instances in this motif group
- 22
Unit IDs
8VVV|1|9|A|1214
8VVV|1|9|C|1215
8VVV|1|9|C|1216
8VVV|1|9|A|1217
*
8VVV|1|9|U|1681
8VVV|1|9|C|1682
8VVV|1|9|C|1683
8VVV|1|9|C|1684
8VVV|1|9|U|1685
Current chains
- Chain 9
- 18S rRNA
Nearby chains
- Chain FF
- uS7
- Chain QQ
- uS9
- Chain aa
- eS26
- Chain cc
- eS28
Coloring options: