IL_8WV1_035
3D structure
- PDB id
- 8WV1 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Ambient Temperature Structure of 50S Ribosomal Subunit from Thermus Thermophilus
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.99 Å
Loop
- Sequence
- CGAAGACAG*UCGAG
- Length
- 14 nucleotides
- Bulged bases
- 8WV1|1|A|A|1091, 8WV1|1|A|A|1092
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8WV1_035 not in the Motif Atlas
- Homologous match to IL_9DFE_041
- Geometric discrepancy: 0.2457
- The information below is about IL_9DFE_041
- Detailed Annotation
- Kink-turn
- Broad Annotation
- No text annotation
- Motif group
- IL_99692.3
- Basepair signature
- cWW-tSS-tSH-L-R-R-L-cWW-L-L
- Number of instances in this motif group
- 6
Unit IDs
8WV1|1|A|C|1089
8WV1|1|A|G|1090
8WV1|1|A|A|1091
8WV1|1|A|A|1092
8WV1|1|A|G|1093
8WV1|1|A|A|1094
8WV1|1|A|C|1095
8WV1|1|A|A|1096
8WV1|1|A|G|1097
*
8WV1|1|A|U|1154
8WV1|1|A|C|1155
8WV1|1|A|G|1156
8WV1|1|A|A|1157
8WV1|1|A|G|1158
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain G
- 50S ribosomal protein L6
Coloring options: