IL_8WV1_136
3D structure
- PDB id
- 8WV1 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Ambient Temperature Structure of 50S Ribosomal Subunit from Thermus Thermophilus
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.99 Å
Loop
- Sequence
- GAUG*CGC
- Length
- 7 nucleotides
- Bulged bases
- 8WV1|1|a|U|1079
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8WV1_136 not in the Motif Atlas
- Homologous match to IL_9DFE_040
- Geometric discrepancy: 0.1768
- The information below is about IL_9DFE_040
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_76400.2
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 11
Unit IDs
8WV1|1|a|G|1077
8WV1|1|a|A|1078
8WV1|1|a|U|1079
8WV1|1|a|G|1080
*
8WV1|1|a|C|1167
8WV1|1|a|G|1168
8WV1|1|a|C|1169
Current chains
- Chain a
- 23S rRNA
Nearby chains
- Chain 9
- 50S ribosomal protein L36
- Chain b
- 5S ribosomal RNA; 5S rRNA
- Chain g
- 50S ribosomal protein L6
- Chain l
- 50S ribosomal protein L16
Coloring options: