IL_8WV1_222
3D structure
- PDB id
- 8WV1 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Ambient Temperature Structure of 50S Ribosomal Subunit from Thermus Thermophilus
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.99 Å
Loop
- Sequence
- CUGUGAAC*GGGAG
- Length
- 13 nucleotides
- Bulged bases
- 8WV1|1|A|U|2154
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8WV1_222 not in the Motif Atlas
- Homologous match to IL_9DFE_087
- Geometric discrepancy: 0.2397
- The information below is about IL_9DFE_087
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8WV1|1|A|C|2151
8WV1|1|A|U|2152
8WV1|1|A|G|2153
8WV1|1|A|U|2154
8WV1|1|A|G|2155
8WV1|1|A|A|2156
8WV1|1|A|A|2157
8WV1|1|A|C|2158
*
8WV1|1|A|G|2177
8WV1|1|A|G|2178
8WV1|1|A|G|2179
8WV1|1|A|A|2180
8WV1|1|A|G|2181
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain 6
- 50S ribosomal protein L33
- Chain a
- Large subunit ribosomal RNA; LSU rRNA
Coloring options: