IL_8Y0U_067
3D structure
- PDB id
- 8Y0U (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- dormant ribosome with STM1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.59 Å
Loop
- Sequence
- UCUUC*GGAAUA
- Length
- 11 nucleotides
- Bulged bases
- 8Y0U|1|C1|U|1629
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8Y0U_067 not in the Motif Atlas
- Homologous match to IL_8C3A_072
- Geometric discrepancy: 0.2107
- The information below is about IL_8C3A_072
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_48431.1
- Basepair signature
- cWW-L-R-L-R-L-cWW
- Number of instances in this motif group
- 2
Unit IDs
8Y0U|1|C1|U|1627
8Y0U|1|C1|C|1628
8Y0U|1|C1|U|1629
8Y0U|1|C1|U|1630
8Y0U|1|C1|C|1631
*
8Y0U|1|C1|G|1811
8Y0U|1|C1|G|1812
8Y0U|1|C1|A|1813
8Y0U|1|C1|A|1814
8Y0U|1|C1|U|1815
8Y0U|1|C1|A|1816
Current chains
- Chain C1
- 25S rRNA
Nearby chains
- Chain LZ
- Large ribosomal subunit protein eL27A
Coloring options: