IL_8Z70_061
3D structure
- PDB id
- 8Z70 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- State 1 (S1) of yeast 80S ribosome bound to 2 tRNAs during mRNA decoding
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- GUC*GUU
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8Z70_061 not in the Motif Atlas
- Homologous match to IL_8C3A_452
- Geometric discrepancy: 0.2108
- The information below is about IL_8C3A_452
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_10289.2
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 237
Unit IDs
8Z70|1|2|G|1213
8Z70|1|2|U|1214
8Z70|1|2|C|1215
*
8Z70|1|2|G|1448
8Z70|1|2|U|1449
8Z70|1|2|U|1450
Current chains
- Chain 2
- 18S rRNA
Nearby chains
- Chain SC
- Small ribosomal subunit protein eS10A
- Chain SE
- Small ribosomal subunit protein uS19
- Chain SM
- Small ribosomal subunit protein uS14A
- Chain SN
- Small ribosomal subunit protein eS31
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