IL_8Z70_204
3D structure
- PDB id
- 8Z70 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- State 1 (S1) of yeast 80S ribosome bound to 2 tRNAs during mRNA decoding
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- UUUUUG*CGAAG
- Length
- 11 nucleotides
- Bulged bases
- 8Z70|1|A|U|3056, 8Z70|1|A|U|3058
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8Z70_204 not in the Motif Atlas
- Homologous match to IL_8P9A_346
- Geometric discrepancy: 0.1633
- The information below is about IL_8P9A_346
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_21001.1
- Basepair signature
- cWW-L-R-tHW-L-cWW
- Number of instances in this motif group
- 3
Unit IDs
8Z70|1|A|U|3054
8Z70|1|A|U|3055
8Z70|1|A|U|3056
8Z70|1|A|U|3057
8Z70|1|A|U|3058
8Z70|1|A|G|3059
*
8Z70|1|A|C|3084
8Z70|1|A|G|3085
8Z70|1|A|A|3086
8Z70|1|A|A|3087
8Z70|1|A|G|3088
Current chains
- Chain A
- 25S rRNA
Nearby chains
- Chain E
- Large ribosomal subunit protein uL3
- Chain Y
- Large ribosomal subunit protein eL24A
- Chain f
- Large ribosomal subunit protein eL31A
Coloring options: