IL_8ZEJ_091
3D structure
- PDB id
- 8ZEJ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of E.coli ribosome in complex with an engineered arrest peptide
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.69 Å
Loop
- Sequence
- GGG*CAAUC
- Length
- 8 nucleotides
- Bulged bases
- 8ZEJ|1|b|G|776, 8ZEJ|1|b|A|788, 8ZEJ|1|b|A|789, 8ZEJ|1|b|U|790
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8ZEJ_091 not in the Motif Atlas
- Geometric match to IL_5J7L_265
- Geometric discrepancy: 0.0645
- The information below is about IL_5J7L_265
- Detailed Annotation
- Multiple bulged bases
- Broad Annotation
- No text annotation
- Motif group
- IL_06549.2
- Basepair signature
- cWW-cWW
- Number of instances in this motif group
- 6
Unit IDs
8ZEJ|1|b|G|775
8ZEJ|1|b|G|776
8ZEJ|1|b|G|777
*
8ZEJ|1|b|C|787
8ZEJ|1|b|A|788
8ZEJ|1|b|A|789
8ZEJ|1|b|U|790
8ZEJ|1|b|C|791
Current chains
- Chain b
- 23S rRNA
Nearby chains
- Chain 6
- 50S ribosomal protein L34
- Chain c
- 50S ribosomal protein L2
- Chain t
- 50S ribosomal protein L22
- Chain z
- eRAP
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