IL_8ZFI_096
3D structure
- PDB id
- 8ZFI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of E.coli ribosome in complex with an engineered arrest peptide and trigger factor
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- AAUUC*GUUAU
- Length
- 10 nucleotides
- Bulged bases
- 8ZFI|1|b|U|846, 8ZFI|1|b|U|931
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8ZFI_096 not in the Motif Atlas
- Geometric match to IL_9E6Q_013
- Geometric discrepancy: 0.2808
- The information below is about IL_9E6Q_013
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_01742.1
- Basepair signature
- cWW-L-cWW-R-cWW
- Number of instances in this motif group
- 3
Unit IDs
8ZFI|1|b|A|844
8ZFI|1|b|A|845
8ZFI|1|b|U|846
8ZFI|1|b|U|847
8ZFI|1|b|C|848
*
8ZFI|1|b|G|930
8ZFI|1|b|U|931
8ZFI|1|b|U|932
8ZFI|1|b|A|933
8ZFI|1|b|U|934
Current chains
- Chain b
- RNA (2903-MER)
Nearby chains
- Chain 2
- 50S ribosomal protein L30
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