IL_8ZGR_183
3D structure
- PDB id
- 8ZGR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 80S ribosome with A/A tRNA and mRNA of WNV
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- UUU*AUG
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8ZGR_183 not in the Motif Atlas
- Geometric match to IL_6RTI_005
- Geometric discrepancy: 0.3461
- The information below is about IL_6RTI_005
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_38565.2
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 12
Unit IDs
8ZGR|1|S2|U|748
8ZGR|1|S2|U|749
8ZGR|1|S2|U|750
*
8ZGR|1|S2|A|799
8ZGR|1|S2|U|800
8ZGR|1|S2|G|801
Current chains
- Chain S2
- chain 2 18S rRNA (1800-MER)
Nearby chains
- Chain SS
- Small ribosomal subunit protein eS4A
- Chain SU
- Small ribosomal subunit protein eS7A
- Chain SX
- Small ribosomal subunit protein uS17A
- Chain Sb
- Small ribosomal subunit protein uS8A
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