IL_8ZGR_192

3D structure

PDB id

8ZGR (explore in PDB, NAKB, or RNA 3D Hub)

Description

80S ribosome with A/A tRNA and mRNA of WNV

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

GGGAUC*GUC

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8ZGR|1|S2|G|985
8ZGR|1|S2|G|986
8ZGR|1|S2|G|987
8ZGR|1|S2|A|988
8ZGR|1|S2|U|989
8ZGR|1|S2|C|990
*
8ZGR|1|S2|G|1014
8ZGR|1|S2|U|1015
8ZGR|1|S2|C|1016

Current chains

Chain S2

chain 2 18S rRNA (1800-MER)

Nearby chains

Chain LD

Large ribosomal subunit protein uL2A

Chain Lr

Large ribosomal subunit protein eL43A

Chain SZ

Small ribosomal subunit protein uS11B

Chain Se

Small ribosomal subunit protein eS26B