IL_8ZGR_192
3D structure
- PDB id
- 8ZGR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 80S ribosome with A/A tRNA and mRNA of WNV
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- GGGAUC*GUC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8ZGR_192 not in the Motif Atlas
- Homologous match to IL_9PN5_189
- Geometric discrepancy: 0.5737
- The information below is about IL_9PN5_189
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_31690.2
- Basepair signature
- cWW-L-cWW-L-cWW-L
- Number of instances in this motif group
- 7
Unit IDs
8ZGR|1|S2|G|985
8ZGR|1|S2|G|986
8ZGR|1|S2|G|987
8ZGR|1|S2|A|988
8ZGR|1|S2|U|989
8ZGR|1|S2|C|990
*
8ZGR|1|S2|G|1014
8ZGR|1|S2|U|1015
8ZGR|1|S2|C|1016
Current chains
- Chain S2
- chain 2 18S rRNA (1800-MER)
Nearby chains
- Chain LD
- Large ribosomal subunit protein uL2A
- Chain Lr
- Large ribosomal subunit protein eL43A
- Chain SZ
- Small ribosomal subunit protein uS11B
- Chain Se
- Small ribosomal subunit protein eS26B
Coloring options: